Package: ezmmek 0.2.4
ezmmek: Easy Michaelis-Menten Enzyme Kinetics
Serves as a platform for published fluorometric enzyme assay protocols. 'ezmmek' calibrates, calculates, and plots enzyme activities as they relate to the transformation of synthetic substrates. At present, 'ezmmek' implements two common protocols found in the literature, and is modular to accommodate additional protocols. Here, these protocols are referred to as the In-Sample Calibration (Hoppe, 1983; <doi:10.3354/meps011299>) and In-Buffer Calibration (German et al., 2011; <doi:10.1016/j.soilbio.2011.03.017>). protocols. By containing multiple protocols, 'ezmmek' aims to stimulate discussion about how to best optimize fluorometric enzyme assays. A standardized approach would make studies more comparable and reproducible.
Authors:
ezmmek_0.2.4.tar.gz
ezmmek_0.2.4.zip(r-4.5)ezmmek_0.2.4.zip(r-4.4)ezmmek_0.2.4.zip(r-4.3)
ezmmek_0.2.4.tgz(r-4.4-any)ezmmek_0.2.4.tgz(r-4.3-any)
ezmmek_0.2.4.tar.gz(r-4.5-noble)ezmmek_0.2.4.tar.gz(r-4.4-noble)
ezmmek_0.2.4.tgz(r-4.4-emscripten)ezmmek_0.2.4.tgz(r-4.3-emscripten)
ezmmek.pdf |ezmmek.html✨
ezmmek/json (API)
| # Install 'ezmmek' in R: |
| install.packages('ezmmek', repos = c('https://ccook.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 4 years agofrom:cb7a920724. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 13 2024 |
| R-4.5-win | OK | Nov 13 2024 |
| R-4.5-linux | OK | Nov 13 2024 |
| R-4.4-win | OK | Nov 13 2024 |
| R-4.4-mac | OK | Nov 13 2024 |
| R-4.3-win | OK | Nov 13 2024 |
| R-4.3-mac | OK | Nov 13 2024 |
Exports:new_ezmmek_act_calibratenew_ezmmek_act_groupnew_ezmmek_sat_fitnew_ezmmek_std_group
Dependencies:assertableclicolorspacecpp11data.tabledplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmenls2pillarpkgconfigprotopurrrR6RColorBrewerrlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| ezmmek_calc_mm_fit | ezmmek_calc_mm_fit |
| ezmmek_calc_std_lm_homo | ezmmek_calc_std_lm_buffer |
| ezmmek_calc_std_lm_homo | ezmmek_calc_std_lm_homo |
| ezmmek_calc_std_lm_homo_buffer | ezmmek_calc_std_lm_homo_buffer |
| ezmmek_calibrate_activities | ezmmek_calibrate_activities |
| ezmmek_std_lm | ezmmek_std_lm |
| new_ezmmek_act_calibrate | new_ezmmek_act_calibrate |
| new_ezmmek_act_group | new_ezmmek_act_group |
| new_ezmmek_sat_fit | new_ezmmek_sat_fit |
| new_ezmmek_std_group | new_ezmmek_std_group |
| plot_new_ezmmek_act_group | plot.new_ezmmek_act_group |
| plot_new_ezmmek_calibrate | plot.new_ezmmek_calibrate |
| plot_new_ezmmek_sat_fit | plot.new_ezmmek_sat_fit |
| plot_new_ezmmek_std_group | plot.new_ezmmek_std_group |
